BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012D05LP1|AL426354
(781 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig367 1118 0.0
>3x_Contig367
Length = 1846
Score = 1118 bits (564), Expect = 0.0
Identities = 573/576 (99%)
Strand = Plus / Plus
Query: 1 cgtcaggaaactgaaggtcgggaacttttgacctgtctgacacactagtttcgtcgacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 cgtcaggaaactgaaggtcgggaacttttgacctgtctgacacactagtttcgtcgacag 1318
Query: 61 tttcgagtaacccggtactgtttagtacaacgttttgtttacttttcagtggtgatccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1319 tttcgagtaacccggtactgtttagtacaacgttttgtttacttttcagtggtgatccag 1378
Query: 121 cttgagcgtgaaaacgagctactttattggatttcttgcatccccttcctcgattttttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1379 cttgagcgtgaaaacgagctactttattggatttcttgcatccccttcctcgattttttg 1438
Query: 181 aggacactagttcattgatcttgaaatcttcatagatccaaggtttcttcgtaattggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1439 aggacactagttcattgatcttgaaatcttcatagatccaaggtttcttcgtaattggat 1498
Query: 241 ttatggagaaatcaaccgagattttaccccttttaatattctccttctcattgttcctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1499 ttatggagaaatcaaccgagattttaccccttttaatattctccttctcattgttcctat 1558
Query: 301 tagcttgtggcatagtagttgcatttattggtgacctaccacgtttagattttgctatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1559 tagcttgtggcatagtagttgcatttattggtgacctaccacgtttagattttgctatga 1618
Query: 361 cactctgatgtgaatgttgtatgttgatatcattctccttcaagatgtctgacgcttggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1619 cactctgatgtgaatgttgtatgttgatatcattctccttcaagatgtctgacgcttggg 1678
Query: 421 aatcaaggataatctcgttttctttcaaaggggaactcatcagctctaaatcacgttgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1679 aatcaaggataatctcgttttctttcaaaggggaactcatcagctctaaatcacgttgta 1738
Query: 481 gtccttgattacgttctcttgccaatggttcagcgtgttcttgttcaatagtacttttca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1739 gtccttgattacgttctcttgccaatggttcagcgtgttcttgttcaatagtacttttca 1798
Query: 541 cagtcgcgtttttcttcacatgtattggatcaaact 576
||||||||||||||||||||| ||||| |||||||
Sbjct: 1799 cagtcgcgtttttcttcacatttattgtctcaaact 1834
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5555
Number of Sequences: 1807
Number of extensions: 5555
Number of successful extensions: 24
Number of sequences better than 1.0e-20: 1
length of query: 781
length of database: 10,358,551
effective HSP length: 16
effective length of query: 765
effective length of database: 10,329,639
effective search space: 7902173835
effective search space used: 7902173835
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)